Human SNP ID | rs2817937 |
---|---|
Human chromosome | chr6 |
Human SNP position | 120777311 |
Pig chromosome | chr4 |
Pig SNP position | 23458913 |
PubMed ID | 20195514 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20195514 |
Study | Genome-wide association study reveals multiple loci associated with primary tooth development during infancy. |
Disease/Trait | Primary tooth development (number of teeth) |
Initial sample | 5,752 European ancestry related individuals |
Replication sample | NA |
Region | 6q22.31 |
Chromosome id | chr6 |
Chromosome position | 120777311 |
Reported gene | intergenic |
Mapped gene | MIR3144 - LOC105377977 |
Upstream gene id | 100422951 |
Downstream gene id | 105377977 |
SNP gene ids | |
Upstream gene distance | 762054 |
Downstream gene distance | 193683 |
SNP risk allele | rs2817937-C |
SNPs | rs2817937 |
Merged | 0 |
SNP id current | 2817937 |
Context | upstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.12 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | |
Or beta | 0.25 |
%95 Ci | % variance |
Platform | Illumina [300766] |
CNV | N |
Mapped trait | odontogenesis |
Mapped trait URI | http://purl.obolibrary.org/obo/GO_0042476 |
Study accession | GCST000610 |