SNP Detail For rs2817937
1.Mapping Information
Human SNP ID rs2817937
Human chromosome chr6
Human SNP position 120777311
Pig chromosome chr4
Pig SNP position 23458913
2.Annotation Information
PubMed ID20195514
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20195514
StudyGenome-wide association study reveals multiple loci associated with primary tooth development during infancy.
Disease/TraitPrimary tooth development (number of teeth)
Initial sample5,752 European ancestry related individuals
Replication sampleNA
Region6q22.31
Chromosome idchr6
Chromosome position120777311
Reported geneintergenic
Mapped geneMIR3144 - LOC105377977
Upstream gene id100422951
Downstream gene id105377977
SNP gene ids
Upstream gene distance762054
Downstream gene distance193683
SNP risk allelers2817937-C
SNPsrs2817937
Merged0
SNP id current2817937
Contextupstream_gene_variant
Intergenic1
Allele frequency0.12
P value0.000003
Pvalue mlog5.52287874528033
P value text
Or beta0.25
%95 Ci% variance
PlatformIllumina [300766]
CNVN
Mapped traitodontogenesis
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0042476
Study accessionGCST000610