Human SNP ID | rs2808634 |
---|---|
Human chromosome | chr1 |
Human SNP position | 159722783 |
Pig chromosome | chr4 |
Pig SNP position | 98749512 |
PubMed ID | 22939635 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/22939635 |
Study | Genome-wide association and population genetic analysis of C-reactive protein in African American and Hispanic American women. |
Disease/Trait | C-reactive protein |
Initial sample | 8,280 African American female individuals, 3,548 Hispanic female individuals |
Replication sample | 3,787 African American female individuals, 3,548 Hispanic female individuals, 5,656 European ancestry individuals |
Region | 1q23.2 |
Chromosome id | chr1 |
Chromosome position | 159722783 |
Reported gene | FCER1A, DUSP23, OR10J1, APCS, DARC, IFI16, OR10J5, CRP, OR10J3, OLFML2B, FCRL6 |
Mapped gene | CRP - RPL27P2 |
Upstream gene id | 1401 |
Downstream gene id | 646446 |
SNP gene ids | |
Upstream gene distance | 8174 |
Downstream gene distance | 36361 |
SNP risk allele | rs2808634-T |
SNPs | rs2808634 |
Merged | 0 |
SNP id current | 2808634 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.156 |
P value | 0.0000000003 |
Pvalue mlog | 9.52287874528033 |
P value text | (AA women) |
Or beta | 0.153 |
%95 Ci | [0.11-0.20] unit decrease |
Platform | Affymetrix [up to 2203609] (imputed) |
CNV | N |
Mapped trait | C-reactive protein measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004458 |
Study accession | GCST001650 |