Human SNP ID | rs2788032 |
---|---|
Human chromosome | chr1 |
Human SNP position | 53311959 |
Pig chromosome | chr6 |
Pig SNP position | 146581584 |
PubMed ID | 23192594 |
---|---|
Journal | Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23192594 |
Study | Gene-environment interactions and obesity traits among postmenopausal African-American and Hispanic women in the Women__s Health Initiative SHARe Study. |
Disease/Trait | Body mass index (interaction) |
Initial sample | 8,203 African American females, 3,484 Hispanic females |
Replication sample | NA |
Region | 1p32.3 |
Chromosome id | chr1 |
Chromosome position | 53311959 |
Reported gene | LRP8 |
Mapped gene | LRP8 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 7804 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2788032-C |
SNPs | rs2788032 |
Merged | 0 |
SNP id current | 2788032 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.08 |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | (Hispanic, Alcohol intake) |
Or beta | 0.15 |
%95 Ci | [0.09-0.22] unit increase |
Platform | Affymetrix [706791] |
CNV | N |
Mapped trait | body mass index |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004340 |
Study accession | GCST001753 |