SNP Detail For rs2786111
1.Mapping Information
Human SNP ID rs2786111
Human chromosome chr1
Human SNP position 197336969
Pig chromosome chr10
Pig SNP position 24772772
2.Annotation Information
PubMed ID24925725
JournalJ Am Soc Nephrol
Linkwww.ncbi.nlm.nih.gov/pubmed/24925725
StudyLupus nephritis susceptibility Loci in women with systemic lupus erythematosus.
Disease/TraitLupus nephritis in systemic lupus erythematosus
Initial sample588 European ancestry cases, 1,412 European ancestry controls
Replication sampleNA
Region1q31.3
Chromosome idchr1
Chromosome position197336969
Reported geneF13B, ASPM, CRB1, ZBTB41, CFHR5
Mapped geneCRB1
Upstream gene id
Downstream gene id
SNP gene ids23418
Upstream gene distance
Downstream gene distance
SNP risk allelers2786111-C
SNPsrs2786111
Merged0
SNP id current2786111
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000005
Pvalue mlog5.30102999566398
P value text(Recessive)
Or beta2.26
%95 Ci[1.60-3.19]
PlatformAffymetrix, Illumina [1621689] (imputed)
CNVN
Mapped traitsystemic lupus erythematosus, lupus nephritis
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0002690, http://www.ebi.ac.uk/efo/EFO_0005761
Study accessionGCST002479