SNP Detail For rs2786098
1.Mapping Information
Human SNP ID rs2786098
Human chromosome chr1
Human SNP position 197356778
Pig chromosome chr10
Pig SNP position 24835521
2.Annotation Information
PubMed ID20032318
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/20032318
StudyVariants of DENND1B associated with asthma in children.
Disease/TraitAsthma
Initial sample793 European ancestry cases, 1,988 European ancestry controls
Replication sample917 European ancestry cases, 1,546 European ancestry controls, 1,667 African American cases, 2,045 African American controls
Region1q31.3
Chromosome idchr1
Chromosome position197356778
Reported geneCRB1, DENND1B
Mapped geneCRB1
Upstream gene id
Downstream gene id
SNP gene ids23418
Upstream gene distance
Downstream gene distance
SNP risk allelers2786098-?
SNPsrs2786098
Merged0
SNP id current2786098
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000000000002
Pvalue mlog12.698970004336
P value text
Or beta
%95 Ci[NR]
PlatformIllumina [~ 550000]
CNVN
Mapped traitasthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST000548
PubMed ID20032318
JournalN Engl J Med
Linkwww.ncbi.nlm.nih.gov/pubmed/20032318
StudyVariants of DENND1B associated with asthma in children.
Disease/TraitAsthma
Initial sample793 European ancestry cases, 1,988 European ancestry controls
Replication sample917 European ancestry cases, 1,546 European ancestry controls, 1,667 African American cases, 2,045 African American controls
Region1q31.3
Chromosome idchr1
Chromosome position197356778
Reported geneDENND1B, CRB1
Mapped geneCRB1
Upstream gene id
Downstream gene id
SNP gene ids23418
Upstream gene distance
Downstream gene distance
SNP risk allelers2786098-?
SNPsrs2786098
Merged0
SNP id current2786098
Contextintron_variant
Intergenic0
Allele frequency0.848
P value0.00000000009
Pvalue mlog10.0457574905606
P value text(EA)
Or beta1.43
%95 Ci
PlatformIllumina [~ 550000]
CNVN
Mapped traitasthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST000548