Human SNP ID | rs27419 |
---|---|
Human chromosome | chr5 |
Human SNP position | 53125108 |
Pig chromosome | chr16 |
Pig SNP position | 34445146 |
PubMed ID | 26198764 |
---|---|
Journal | Am J Med Genet B Neuropsychiatr Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26198764 |
Study | Genome-wide association study of schizophrenia in Ashkenazi Jews. |
Disease/Trait | Schizophrenia |
Initial sample | 592 Ashkenazi Jewish ancestry cases, 505 Ashkenazi Jewish ancestry controls, 36,989 cases, 113,075 controls |
Replication sample | NA |
Region | 5q11.2 |
Chromosome id | chr5 |
Chromosome position | 53125108 |
Reported gene | NR |
Mapped gene | LOC257396 - LOC105378965 |
Upstream gene id | 257396 |
Downstream gene id | 105378965 |
SNP gene ids | |
Upstream gene distance | 9982 |
Downstream gene distance | 174551 |
SNP risk allele | rs27419-C |
SNPs | rs27419 |
Merged | |
SNP id current | 27419 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000007 |
Pvalue mlog | 5.15490195998574 |
P value text | |
Or beta | 1.0526316 |
%95 Ci | [NR] |
Platform | Illumina [7158791] (imputed) |
CNV | N |
Mapped trait | schizophrenia |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000692 |
Study accession | GCST003048 |