SNP Detail For rs273913
1.Mapping Information
Human SNP ID rs273913
Human chromosome chr5
Human SNP position 132325463
Pig chromosome chr2
Pig SNP position 140027298
2.Annotation Information
PubMed ID24816252
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24816252
StudyAn atlas of genetic influences on human blood metabolites.
Disease/TraitBlood metabolite levels
Initial sample7,824 European ancestry individuals
Replication sampleNA
Region5q31.1
Chromosome idchr5
Chromosome position132325463
Reported geneSLC22A4
Mapped geneLOC553103, SLC22A4
Upstream gene id
Downstream gene id
SNP gene ids553103, 6583
Upstream gene distance
Downstream gene distance
SNP risk allelers273913-T
SNPsrs273913
Merged0
SNP id current273913
Contextintron_variant
Intergenic0
Allele frequency0.38
P value1E-25
Pvalue mlog25
P value text(3-dehydrocarnitine)
Or beta0.026
%95 Ci[0.02-0.032] unit increase
PlatformAffymetrix, Illumina [2100000] (imputed)
CNVN
Mapped traitblood metabolite measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005664
Study accessionGCST002443