Human SNP ID | rs273218 |
---|---|
Human chromosome | chr5 |
Human SNP position | 54084725 |
Pig chromosome | chr16 |
Pig SNP position | 35322206 |
PubMed ID | 23793025 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23793025 |
Study | Genome-wide meta-analysis identifies new susceptibility loci for migraine. |
Disease/Trait | Migraine |
Initial sample | 23,285 European ancestry cases, 95,425 European ancestry controls |
Replication sample | NA |
Region | 5q11.2 |
Chromosome id | chr5 |
Chromosome position | 54084725 |
Reported gene | intergenic |
Mapped gene | ARL15 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 54622 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs273218-? |
SNPs | rs273218 |
Merged | 0 |
SNP id current | 273218 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.8 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | 1.06 |
%95 Ci | [1.04-1.1] |
Platform | Affymetrix, Illumina [~ 2300000] (imputed) |
CNV | N |
Mapped trait | migraine disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003821 |
Study accession | GCST002081 |