SNP Detail For rs273218
1.Mapping Information
Human SNP ID rs273218
Human chromosome chr5
Human SNP position 54084725
Pig chromosome chr16
Pig SNP position 35322206
2.Annotation Information
PubMed ID23793025
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23793025
StudyGenome-wide meta-analysis identifies new susceptibility loci for migraine.
Disease/TraitMigraine
Initial sample23,285 European ancestry cases, 95,425 European ancestry controls
Replication sampleNA
Region5q11.2
Chromosome idchr5
Chromosome position54084725
Reported geneintergenic
Mapped geneARL15
Upstream gene id
Downstream gene id
SNP gene ids54622
Upstream gene distance
Downstream gene distance
SNP risk allelers273218-?
SNPsrs273218
Merged0
SNP id current273218
Contextintron_variant
Intergenic0
Allele frequency0.8
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.06
%95 Ci[1.04-1.1]
PlatformAffymetrix, Illumina [~ 2300000] (imputed)
CNVN
Mapped traitmigraine disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003821
Study accessionGCST002081