Human SNP ID | rs2731006 |
---|---|
Human chromosome | chr12 |
Human SNP position | 42767023 |
Pig chromosome | chr5 |
Pig SNP position | 76596436 |
PubMed ID | 19165232 |
---|---|
Journal | J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19165232 |
Study | Genome-wide association study of panic disorder in the Japanese population. |
Disease/Trait | Panic disorder |
Initial sample | 200 Japanese ancestry cases, 200 Japanese ancestry controls |
Replication sample | NA |
Region | 12q12 |
Chromosome id | chr12 |
Chromosome position | 42767023 |
Reported gene | intergenic |
Mapped gene | LOC105369739 - LOC105369740 |
Upstream gene id | 105369739 |
Downstream gene id | 105369740 |
SNP gene ids | |
Upstream gene distance | 49925 |
Downstream gene distance | 387420 |
SNP risk allele | rs2731006-? |
SNPs | rs2731006 |
Merged | 0 |
SNP id current | 2731006 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.29 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [253903] |
CNV | N |
Mapped trait | panic disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004262 |
Study accession | GCST000320 |