Human SNP ID | rs2729409 |
---|---|
Human chromosome | chr18 |
Human SNP position | 30561722 |
Pig chromosome | chr6 |
Pig SNP position | 107139024 |
PubMed ID | 18464913 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18464913 |
Study | A genome-wide association study identifies protein quantitative trait loci (pQTLs). |
Disease/Trait | Protein quantitative trait loci |
Initial sample | 1,200 European ancestry individuals |
Replication sample | up to 4,590 European ancestry individuals |
Region | 18q12.1 |
Chromosome id | chr18 |
Chromosome position | 30561722 |
Reported gene | DSC3 |
Mapped gene | LOC105372047 - DSC3 |
Upstream gene id | 105372047 |
Downstream gene id | 1825 |
SNP gene ids | |
Upstream gene distance | 227738 |
Downstream gene distance | 427643 |
SNP risk allele | rs2729409-? |
SNPs | rs2729409 |
Merged | 0 |
SNP id current | 2729409 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.26 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (Parathyroid hormone) |
Or beta | |
%95 Ci | |
Platform | Illumina [496032] |
CNV | N |
Mapped trait | parathyroid hormone measurement |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004752 |
Study accession | GCST000189 |