SNP Detail For rs2727943
1.Mapping Information
Human SNP ID rs2727943
Human chromosome chr3
Human SNP position 1856289
Pig chromosome chr13
Pig SNP position 64460726
2.Annotation Information
PubMed ID22205951
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/22205951
StudyGenome-wide association study in bipolar patients stratified by co-morbidity.
Disease/TraitBipolar disorder
Initial sample1,000 European ancestry cases, 1,034 European ancestry controls
Replication sampleNA
Region3p26.3
Chromosome idchr3
Chromosome position1856289
Reported geneintergenic
Mapped geneRPL23AP38 - RPL21P17
Upstream gene id391504
Downstream gene id727810
SNP gene ids
Upstream gene distance260032
Downstream gene distance49359
SNP risk allelers2727943-?
SNPsrs2727943
Merged0
SNP id current2727943
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.00000003
Pvalue mlog7.52287874528033
P value text(Latent Class 2)
Or beta
%95 Ci
PlatformAffymetrix [728331]
CNVN
Mapped traitbipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST001359