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SNP Detail For rs2722425
1.Mapping Information
| Human SNP ID | rs2722425 |
|---|---|
| Human chromosome | chr8 |
| Human SNP position | 40626720 |
| Pig chromosome | chr17 |
| Pig SNP position | 11252543 |
2.Annotation Information
| PubMed ID | 17903298 |
|---|---|
| Journal | BMC Med Genet |
| Link | www.ncbi.nlm.nih.gov/pubmed/17903298 |
| Study | Genome-wide association with diabetes-related traits in the Framingham Heart Study. |
| Disease/Trait | Fasting plasma glucose |
| Initial sample | 1,027 individuals |
| Replication sample | NA |
| Region | 8p11.21 |
| Chromosome id | chr8 |
| Chromosome position | 40626720 |
| Reported gene | ZMAT4 |
| Mapped gene | ZMAT4 |
| Upstream gene id | |
| Downstream gene id | |
| SNP gene ids | 79698 |
| Upstream gene distance | |
| Downstream gene distance | |
| SNP risk allele | rs2722425-? |
| SNPs | rs2722425 |
| Merged | 0 |
| SNP id current | 2722425 |
| Context | intron_variant |
| Intergenic | 0 |
| Allele frequency | NR |
| P value | 0.00000002 |
| Pvalue mlog | 7.69897000433601 |
| P value text | (tFPG) |
| Or beta | |
| %95 Ci | |
| Platform | Affymetrix [70897] |
| CNV | N |
| Mapped trait | fasting blood glucose measurement |
| Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004465 |
| Study accession | GCST000085 |
| PubMed ID | 17903298 |
| Journal | BMC Med Genet |
| Link | www.ncbi.nlm.nih.gov/pubmed/17903298 |
| Study | Genome-wide association with diabetes-related traits in the Framingham Heart Study. |
| Disease/Trait | Fasting plasma glucose |
| Initial sample | 1,027 individuals |
| Replication sample | NA |
| Region | 8p11.21 |
| Chromosome id | chr8 |
| Chromosome position | 40626720 |
| Reported gene | ZMAT4 |
| Mapped gene | ZMAT4 |
| Upstream gene id | |
| Downstream gene id | |
| SNP gene ids | 79698 |
| Upstream gene distance | |
| Downstream gene distance | |
| SNP risk allele | rs2722425-? |
| SNPs | rs2722425 |
| Merged | 0 |
| SNP id current | 2722425 |
| Context | intron_variant |
| Intergenic | 0 |
| Allele frequency | NR |
| P value | 0.000009 |
| Pvalue mlog | 5.04575749056067 |
| P value text | (FPG) |
| Or beta | |
| %95 Ci | |
| Platform | Affymetrix [70897] |
| CNV | N |
| Mapped trait | fasting blood glucose measurement |
| Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004465 |
| Study accession | GCST000085 |
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