SNP Detail For rs2721937
1.Mapping Information
Human SNP ID rs2721937
Human chromosome chr8
Human SNP position 115621472
Pig chromosome chr4
Pig SNP position 24702226
2.Annotation Information
PubMed ID22472876
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/22472876
StudyA mega-analysis of genome-wide association studies for major depressive disorder.
Disease/TraitMajor depressive disorder
Initial sample9,240 European ancestry cases, 9,519 European ancestry controls
Replication sample6,783 European ancestry cases, 50,695 European ancestry controls
Region8q23.3
Chromosome idchr8
Chromosome position115621472
Reported geneTRPS1
Mapped geneTRPS1
Upstream gene id
Downstream gene id
SNP gene ids7227
Upstream gene distance
Downstream gene distance
SNP risk allelers2721937-?
SNPsrs2721937
Merged0
SNP id current2721937
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text
Or beta
%95 Ci
PlatformAffymetrix, Illumina, Perlegen [~ 1200000] (imputed)
CNVN
Mapped traitunipolar depression
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003761
Study accessionGCST001469