Human SNP ID | rs2721173 |
---|---|
Human chromosome | chr8 |
Human SNP position | 144519045 |
Pig chromosome | chr4 |
Pig SNP position | 376978 |
PubMed ID | 25201988 |
---|---|
Journal | Proc Natl Acad Sci U S A |
Link | www.ncbi.nlm.nih.gov/pubmed/25201988 |
Study | Common genetic variants associated with cognitive performance identified using the proxy-phenotype method. |
Disease/Trait | Educational attainment |
Initial sample | 106,736 European ancestry individuals |
Replication sample | NA |
Region | 8q24.3 |
Chromosome id | chr8 |
Chromosome position | 144519045 |
Reported gene | GPT, PPP1R16A, VPS28, MFSD3, RECQL4, LRRC14, ARHGAP39, FOXH1, KIFC2, CYHR1, CPSF1, SCRT1, LRRC24 |
Mapped gene | LRRC14 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 9684 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2721173-T |
SNPs | rs2721173 |
Merged | 0 |
SNP id current | 2721173 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.473 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.02 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [NR] (imputed) |
CNV | N |
Mapped trait | self reported educational attainment |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004784 |
Study accession | GCST002598 |