Human SNP ID | rs2717128 |
---|---|
Human chromosome | chr18 |
Human SNP position | 77275676 |
Pig chromosome | chr1 |
Pig SNP position | 162976005 |
PubMed ID | 20031603 |
---|---|
Journal | Circ Cardiovasc Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/20031603 |
Study | A genome-wide association scan of RR and QT interval duration in 3 European genetically isolated populations: the EUROSPAN project. |
Disease/Trait | RR interval (heart rate) |
Initial sample | 2,325 European ancestry individuals |
Replication sample | NA |
Region | 18q23 |
Chromosome id | chr18 |
Chromosome position | 77275676 |
Reported gene | intergenic |
Mapped gene | GALR1 - LINC01029 |
Upstream gene id | 2587 |
Downstream gene id | 101927715 |
SNP gene ids | |
Upstream gene distance | 5534 |
Downstream gene distance | 695618 |
SNP risk allele | rs2717128-G |
SNPs | rs2717128 |
Merged | 0 |
SNP id current | 2717128 |
Context | 3_prime_UTR_variant |
Intergenic | 1 |
Allele frequency | 0.14 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 0.19 |
%95 Ci | [0.11-0.27] unit decrease |
Platform | Illumina [~ 318327] |
CNV | N |
Mapped trait | RR interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004831 |
Study accession | GCST000451 |