Human SNP ID | rs2710833 |
---|---|
Human chromosome | chr4 |
Human SNP position | 168488807 |
Pig chromosome | chr14 |
Pig SNP position | 22414999 |
PubMed ID | 20708005 |
---|---|
Journal | Gastroenterology |
Link | www.ncbi.nlm.nih.gov/pubmed/20708005 |
Study | Genome-wide association study identifies variants associated with histologic features of nonalcoholic Fatty liver disease. |
Disease/Trait | Non-alcoholic fatty liver disease histology (AST) |
Initial sample | 236 European ancestry cases |
Replication sample | NA |
Region | 4q32.3 |
Chromosome id | chr4 |
Chromosome position | 168488807 |
Reported gene | DDX60L, PALLD |
Mapped gene | DDX60L - PALLD |
Upstream gene id | 91351 |
Downstream gene id | 23022 |
SNP gene ids | |
Upstream gene distance | 8292 |
Downstream gene distance | 8257 |
SNP risk allele | rs2710833-A |
SNPs | rs2710833 |
Merged | 0 |
SNP id current | 2710833 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.17 |
P value | 0.0000006 |
Pvalue mlog | 6.22184874961635 |
P value text | |
Or beta | 0.41 |
%95 Ci | [NR] unit increase |
Platform | Illumina [324623] |
CNV | N |
Mapped trait | non-alcoholic fatty liver disease, cirrhosis of liver |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0003095, http://www.ebi.ac.uk/efo/EFO_0001422 |
Study accession | GCST000767 |