Human SNP ID | rs2708240 |
---|---|
Human chromosome | chr7 |
Human SNP position | 147880445 |
Pig chromosome | chr9 |
Pig SNP position | 121214533 |
PubMed ID | 23459443 |
---|---|
Journal | Pharmacogenomics J |
Link | www.ncbi.nlm.nih.gov/pubmed/23459443 |
Study | Drug-gene interactions and the search for missing heritability: a cross-sectional pharmacogenomics study of the QT interval. |
Disease/Trait | QT interval (interaction) |
Initial sample | 33,781 European ancestry individuals |
Replication sample | NA |
Region | 7q35 |
Chromosome id | chr7 |
Chromosome position | 147880445 |
Reported gene | CNTNAP2 |
Mapped gene | CNTNAP2 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 26047 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2708240-A |
SNPs | rs2708240 |
Merged | 0 |
SNP id current | 2708240 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.51 |
P value | 0.000004 |
Pvalue mlog | 5.39794000867203 |
P value text | (Tri-Tetra/cyclic antidepressants) |
Or beta | |
%95 Ci | |
Platform | Affymetrix, Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | QT interval |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004682 |
Study accession | GCST001890 |