SNP Detail For rs2699783
1.Mapping Information
Human SNP ID rs2699783
Human chromosome chr2
Human SNP position 66031567
Pig chromosome chr3
Pig SNP position 79748514
2.Annotation Information
PubMed ID24322204
JournalMol Psychiatry
Linkwww.ncbi.nlm.nih.gov/pubmed/24322204
StudyGenome-wide association study of bipolar disorder accounting for effect of body mass index identifies a new risk allele in TCF7L2.
Disease/TraitBipolar disorder (body mass index interaction)
Initial sample388 European ancestry cases, 1,020 European ancestry controls
Replication sampleNA
Region2p14
Chromosome idchr2
Chromosome position66031567
Reported geneMIR4778
Mapped geneLOC105369168
Upstream gene id
Downstream gene id
SNP gene ids105369168
Upstream gene distance
Downstream gene distance
SNP risk allelers2699783-?
SNPsrs2699783
Merged0
SNP id current2699783
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000007
Pvalue mlog5.15490195998574
P value text
Or beta
%95 Ci
PlatformNR [up to 8466825] (imputed)
CNVN
Mapped traitbipolar disorder, body mass index
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000289, http://www.ebi.ac.uk/efo/EFO_0004340
Study accessionGCST002306