SNP Detail For rs268786
1.Mapping Information
Human SNP ID rs268786
Human chromosome chr1
Human SNP position 237192685
Pig chromosome chr14
Pig SNP position 58233339
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region1q43
Chromosome idchr1
Chromosome position237192685
Reported geneRYR2
Mapped geneRYR2
Upstream gene id
Downstream gene id
SNP gene ids6262
Upstream gene distance
Downstream gene distance
SNP risk allelers268786-C
SNPsrs268786
Merged0
SNP id current268786
Contextintron_variant
Intergenic0
Allele frequency0.014
P value0.000008
Pvalue mlog5.09691001300805
P value text(Free T3 )
Or beta0.02
%95 Ci[NR] pg/mL increase
PlatformIllumina [899892]
CNVN
Mapped traithormone measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004730
Study accessionGCST001762