SNP Detail For rs268067
1.Mapping Information
Human SNP ID rs268067
Human chromosome chr2
Human SNP position 59653910
Pig chromosome chr3
Pig SNP position 86229525
2.Annotation Information
PubMed ID25231870
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/25231870
StudyParent-of-origin-specific allelic associations among 106 genomic loci for age at menarche.
Disease/TraitMenarche (age at onset)
Initial sampleUp to 182,413 European ancestry females
Replication sampleNA
Region2p16.1
Chromosome idchr2
Chromosome position59653910
Reported geneBCL11A
Mapped geneLOC105374754 - LOC105374755
Upstream gene id105374754
Downstream gene id105374755
SNP gene ids
Upstream gene distance265561
Downstream gene distance611008
SNP risk allelers268067-A
SNPsrs268067
Merged0
SNP id current268067
Contextintron_variant
Intergenic1
Allele frequency0.8
P value0.00000003
Pvalue mlog7.52287874528033
P value text
Or beta0.04
%95 Ci[0.028-0.052] unit increase
PlatformAffymetrix, Illumina [2441815] (imputed)
CNVN
Mapped traitage at menarche
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004703
Study accessionGCST002541