Human SNP ID | rs268067 |
---|---|
Human chromosome | chr2 |
Human SNP position | 59653910 |
Pig chromosome | chr3 |
Pig SNP position | 86229525 |
PubMed ID | 25231870 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/25231870 |
Study | Parent-of-origin-specific allelic associations among 106 genomic loci for age at menarche. |
Disease/Trait | Menarche (age at onset) |
Initial sample | Up to 182,413 European ancestry females |
Replication sample | NA |
Region | 2p16.1 |
Chromosome id | chr2 |
Chromosome position | 59653910 |
Reported gene | BCL11A |
Mapped gene | LOC105374754 - LOC105374755 |
Upstream gene id | 105374754 |
Downstream gene id | 105374755 |
SNP gene ids | |
Upstream gene distance | 265561 |
Downstream gene distance | 611008 |
SNP risk allele | rs268067-A |
SNPs | rs268067 |
Merged | 0 |
SNP id current | 268067 |
Context | intron_variant |
Intergenic | 1 |
Allele frequency | 0.8 |
P value | 0.00000003 |
Pvalue mlog | 7.52287874528033 |
P value text | |
Or beta | 0.04 |
%95 Ci | [0.028-0.052] unit increase |
Platform | Affymetrix, Illumina [2441815] (imputed) |
CNV | N |
Mapped trait | age at menarche |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004703 |
Study accession | GCST002541 |