SNP Detail For rs2675669
1.Mapping Information
Human SNP ID rs2675669
Human chromosome chr10
Human SNP position 73894114
Pig chromosome chr14
Pig SNP position 82736648
2.Annotation Information
PubMed ID26626624
JournalAm J Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/26626624
StudyGenome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture.
Disease/TraitPsoriasis vulgaris
Initial sample4,007 European ancestry cases, 4,934 European ancestry controls
Replication sampleup to 9,075 European ancestry cases, up to European ancestry 12,726 controls
Region10q22.2
Chromosome idchr10
Chromosome position73894114
Reported geneCAMK2G
Mapped geneCAMK2G - PLAU
Upstream gene id818
Downstream gene id5328
SNP gene ids
Upstream gene distance19523
Downstream gene distance15068
SNP risk allelers2675669-T
SNPsrs2675669
Merged0
SNP id current2675669
Contextintergenic_variant
Intergenic1
Allele frequency0.5718
P value0.00000000004
Pvalue mlog10.397940008672
P value text
Or beta1.13
%95 CiNR
PlatformIllumina [up to 11532644] (imputed)
CNVN
Mapped trait
Mapped trait URI
Study accessionGCST003268