Human SNP ID | rs2675669 |
---|---|
Human chromosome | chr10 |
Human SNP position | 73894114 |
Pig chromosome | chr14 |
Pig SNP position | 82736648 |
PubMed ID | 26626624 |
---|---|
Journal | Am J Hum Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/26626624 |
Study | Genome-wide Association Analysis of Psoriatic Arthritis and Cutaneous Psoriasis Reveals Differences in Their Genetic Architecture. |
Disease/Trait | Psoriasis vulgaris |
Initial sample | 4,007 European ancestry cases, 4,934 European ancestry controls |
Replication sample | up to 9,075 European ancestry cases, up to European ancestry 12,726 controls |
Region | 10q22.2 |
Chromosome id | chr10 |
Chromosome position | 73894114 |
Reported gene | CAMK2G |
Mapped gene | CAMK2G - PLAU |
Upstream gene id | 818 |
Downstream gene id | 5328 |
SNP gene ids | |
Upstream gene distance | 19523 |
Downstream gene distance | 15068 |
SNP risk allele | rs2675669-T |
SNPs | rs2675669 |
Merged | 0 |
SNP id current | 2675669 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.5718 |
P value | 0.00000000004 |
Pvalue mlog | 10.397940008672 |
P value text | |
Or beta | 1.13 |
%95 Ci | NR |
Platform | Illumina [up to 11532644] (imputed) |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003268 |