Human SNP ID | rs266590 |
---|---|
Human chromosome | chr5 |
Human SNP position | 65051794 |
Pig chromosome | chr16 |
Pig SNP position | 46910134 |
PubMed ID | 23251661 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/23251661 |
Study | Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. |
Disease/Trait | Obesity-related traits |
Initial sample | 815 Hispanic children from 263 families |
Replication sample | NA |
Region | 5q12.3 |
Chromosome id | chr5 |
Chromosome position | 65051794 |
Reported gene | SDCCAG10, CWC27 |
Mapped gene | CWC27 - ADAMTS6 |
Upstream gene id | 10283 |
Downstream gene id | 11174 |
SNP gene ids | |
Upstream gene distance | 33031 |
Downstream gene distance | 96942 |
SNP risk allele | rs266590-G |
SNPs | rs266590 |
Merged | 0 |
SNP id current | 266590 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.485 |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (Gestational age ) |
Or beta | 0.05 |
%95 Ci | [NR] wk increase |
Platform | Illumina [899892] |
CNV | N |
Mapped trait | gestational age |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0005112 |
Study accession | GCST001762 |