SNP Detail For rs2648708
1.Mapping Information
Human SNP ID rs2648708
Human chromosome chr10
Human SNP position 12559440
Pig chromosome chr10
Pig SNP position 65040883
2.Annotation Information
PubMed ID25886283
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25886283
StudyGenome-wide association study of serum minerals levels in children of different ethnic background.
Disease/TraitCalcium levels
Initial sample5,261 European ancestry children, 3,817 African-American ancestry children
Replication sample
Region10p13
Chromosome idchr10
Chromosome position12559440
Reported geneNR
Mapped geneCAMK1D
Upstream gene id
Downstream gene id
SNP gene ids57118
Upstream gene distance
Downstream gene distance
SNP risk allelers2648708-T
SNPsrs2648708
Merged0
SNP id current2648708
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000008
Pvalue mlog5.09691001300805
P value text(EA)
Or beta0.0696
%95 Ci[-0.10002--0.03918] mg/dl decrease
PlatformIllumina [up to 507950]
CNVN
Mapped traitcalcium measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004838
Study accessionGCST002857