SNP Detail For rs2647264
1.Mapping Information
Human SNP ID rs2647264
Human chromosome chr4
Human SNP position 105347437
Pig chromosome chr8
Pig SNP position 124876215
2.Annotation Information
PubMed ID22658931
JournalVaccine
Linkwww.ncbi.nlm.nih.gov/pubmed/22658931
StudyA genome-wide association study of host genetic determinants of the antibody response to Anthrax Vaccine Adsorbed.
Disease/TraitImmune response to anthrax vaccine
Initial sample726 European ancestry individuals
Replication sampleNA
Region4q24
Chromosome idchr4
Chromosome position105347437
Reported geneTET2, PPA2
Mapped geneTET2-AS1
Upstream gene id
Downstream gene id
SNP gene ids104384744
Upstream gene distance
Downstream gene distance
SNP risk allelers2647264-G
SNPsrs2647264
Merged0
SNP id current2647264
Contextintergenic_variant
Intergenic0
Allele frequencyNR
P value0.000009
Pvalue mlog5.04575749056067
P value text
Or beta0.165
%95 Ci[0.092-0.238] unit increase
PlatformAffymetrix [736996]
CNVN
Mapped traitresponse to vaccine
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004645
Study accessionGCST001547