Human SNP ID | rs2647264 |
---|---|
Human chromosome | chr4 |
Human SNP position | 105347437 |
Pig chromosome | chr8 |
Pig SNP position | 124876215 |
PubMed ID | 22658931 |
---|---|
Journal | Vaccine |
Link | www.ncbi.nlm.nih.gov/pubmed/22658931 |
Study | A genome-wide association study of host genetic determinants of the antibody response to Anthrax Vaccine Adsorbed. |
Disease/Trait | Immune response to anthrax vaccine |
Initial sample | 726 European ancestry individuals |
Replication sample | NA |
Region | 4q24 |
Chromosome id | chr4 |
Chromosome position | 105347437 |
Reported gene | TET2, PPA2 |
Mapped gene | TET2-AS1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 104384744 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2647264-G |
SNPs | rs2647264 |
Merged | 0 |
SNP id current | 2647264 |
Context | intergenic_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | |
Or beta | 0.165 |
%95 Ci | [0.092-0.238] unit increase |
Platform | Affymetrix [736996] |
CNV | N |
Mapped trait | response to vaccine |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004645 |
Study accession | GCST001547 |