SNP Detail For rs2646928
1.Mapping Information
Human SNP ID rs2646928
Human chromosome chr6
Human SNP position 37487051
Pig chromosome chr7
Pig SNP position 37974004
2.Annotation Information
PubMed ID25918132
JournalToxicol Sci
Linkwww.ncbi.nlm.nih.gov/pubmed/25918132
StudyGenome-wide association study identifies novel loci associated with diisocyanate-induced occupational asthma.
Disease/TraitDiisocyanate-induced asthma
Initial sample74 European ancestry cases, 824 European ancestry controls
Replication sampleNA
Region6p21.2
Chromosome idchr6
Chromosome position37487051
Reported geneC6orf129, FTSJD2, FLJ45825
Mapped geneCCDC167
Upstream gene id
Downstream gene id
SNP gene ids154467
Upstream gene distance
Downstream gene distance
SNP risk allelers2646928-G
SNPsrs2646928
Merged0
SNP id current2646928
Contextintron_variant
Intergenic0
Allele frequency0.001
P value0.000001
Pvalue mlog6
P value text
Or beta34.08
%95 Ci[3.52-329.69]
PlatformIllumina [1556551]
CNVN
Mapped traitresponse to diisocyanate, asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006995, http://www.ebi.ac.uk/efo/EFO_0000270
Study accessionGCST002875