Human SNP ID | rs2643217 |
---|---|
Human chromosome | chr15 |
Human SNP position | 38711562 |
Pig chromosome | chr1 |
Pig SNP position | 147971885 |
PubMed ID | 20889312 |
---|---|
Journal | Schizophr Res |
Link | www.ncbi.nlm.nih.gov/pubmed/20889312 |
Study | A genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder. |
Disease/Trait | Bipolar disorder and schizophrenia |
Initial sample | 651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls |
Replication sample | NA |
Region | 15q14 |
Chromosome id | chr15 |
Chromosome position | 38711562 |
Reported gene | NR |
Mapped gene | C15orf53 - LOC105370776 |
Upstream gene id | 400359 |
Downstream gene id | 105370776 |
SNP gene ids | |
Upstream gene distance | 11524 |
Downstream gene distance | 18181 |
SNP risk allele | rs2643217-? |
SNPs | rs2643217 |
Merged | 0 |
SNP id current | 2643217 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000006 |
Pvalue mlog | 5.22184874961635 |
P value text | |
Or beta | 1.2713 |
%95 Ci | [NR] |
Platform | Affymetrix [722112] |
CNV | N |
Mapped trait | mental or behavioural disorder |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000677 |
Study accession | GCST000821 |