Human SNP ID | rs263156 |
---|---|
Human chromosome | chr6 |
Human SNP position | 142586378 |
Pig chromosome | chr1 |
Pig SNP position | 25135561 |
PubMed ID | 26105758 |
---|---|
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/26105758 |
Study | A genome-wide association study identifies multiple loci for variation in human ear morphology. |
Disease/Trait | Lobe size |
Initial sample | 4,919 Latin American individuals |
Replication sample | NA |
Region | 6q24.2 |
Chromosome id | chr6 |
Chromosome position | 142586378 |
Reported gene | GPR126, LOC153910 |
Mapped gene | LOC153910 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 153910 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs263156-C |
SNPs | rs263156 |
Merged | |
SNP id current | 263156 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.67 |
P value | 0.0000000000003 |
Pvalue mlog | 12.5228787452803 |
P value text | |
Or beta | 0.109 |
%95 Ci | unit increase |
Platform | Illumina [671038] |
CNV | N |
Mapped trait | lobe size |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007666 |
Study accession | GCST002999 |
PubMed ID | 26105758 |
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/26105758 |
Study | A genome-wide association study identifies multiple loci for variation in human ear morphology. |
Disease/Trait | Lobe attachment |
Initial sample | 4,919 Latin American individuals |
Replication sample | NA |
Region | 6q24.2 |
Chromosome id | chr6 |
Chromosome position | 142586378 |
Reported gene | LOC153910, GPR126 |
Mapped gene | LOC153910 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 153910 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs263156-C |
SNPs | rs263156 |
Merged | |
SNP id current | 263156 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.67 |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [671038] |
CNV | N |
Mapped trait | lobe attachment |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007667 |
Study accession | GCST002998 |
PubMed ID | 26105758 |
Journal | Nat Commun |
Link | www.ncbi.nlm.nih.gov/pubmed/26105758 |
Study | A genome-wide association study identifies multiple loci for variation in human ear morphology. |
Disease/Trait | Ear morphology |
Initial sample | 4,919 Latin American individuals |
Replication sample | NA |
Region | 6q24.2 |
Chromosome id | chr6 |
Chromosome position | 142586378 |
Reported gene | LOC153910, GPR126 |
Mapped gene | LOC153910 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 153910 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs263156-C |
SNPs | rs263156 |
Merged | |
SNP id current | 263156 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.67 |
P value | 0.000000005 |
Pvalue mlog | 8.30102999566398 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Illumina [671038] |
CNV | N |
Mapped trait | outer ear morphology trait |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0007664 |
Study accession | GCST003001 |