Human SNP ID | rs2630788 |
---|---|
Human chromosome | chr3 |
Human SNP position | 21833634 |
Pig chromosome | chr13 |
Pig SNP position | 9952595 |
PubMed ID | 26528553 |
---|---|
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26528553 |
Study | Genome-Wide Association Studies of the Human Gut Microbiota. |
Disease/Trait | Gut microbiome composition (summer and winter) |
Initial sample | 127 Hutterite individuals |
Replication sample | NA |
Region | 3p24.3 |
Chromosome id | chr3 |
Chromosome position | 21833634 |
Reported gene | NR |
Mapped gene | ZNF385D |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 79750 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2630788-? |
SNPs | rs2630788 |
Merged | 0 |
SNP id current | 2630788 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | |
P value | 0.00000004 |
Pvalue mlog | 7.39794000867203 |
P value text | (genus_Anaerostipes) |
Or beta | 0.9837498 |
%95 Ci | [0.65-1.32] unit increase |
Platform | Affymetrix [212153] |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003222 |
PubMed ID | 26528553 |
Journal | PLoS One |
Link | www.ncbi.nlm.nih.gov/pubmed/26528553 |
Study | Genome-Wide Association Studies of the Human Gut Microbiota. |
Disease/Trait | Gut microbiome composition (summer) |
Initial sample | 91 Hutterite individuals |
Replication sample | NA |
Region | 3p24.3 |
Chromosome id | chr3 |
Chromosome position | 21833634 |
Reported gene | NR |
Mapped gene | ZNF385D |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 79750 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2630788-? |
SNPs | rs2630788 |
Merged | 0 |
SNP id current | 2630788 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.0000008 |
Pvalue mlog | 6.09691001300805 |
P value text | (genus_Anaerostipes) |
Or beta | 1.019148 |
%95 Ci | [0.64-1.4] unit increase |
Platform | Affymetrix [210924] |
CNV | N |
Mapped trait | |
Mapped trait URI | |
Study accession | GCST003221 |