Human SNP ID | rs2623702 |
---|---|
Human chromosome | chr8 |
Human SNP position | 3737384 |
Pig chromosome | chr15 |
Pig SNP position | 40059056 |
PubMed ID | 22424883 |
---|---|
Journal | J Allergy Clin Immunol |
Link | www.ncbi.nlm.nih.gov/pubmed/22424883 |
Study | Genome-wide association study of lung function decline in adults with and without asthma. |
Disease/Trait | Pulmonary function decline |
Initial sample | 1,441 European ancestry asthma cases, 2,677 European ancestry controls |
Replication sample | 1,160 European ancestry asthma cases, 10,858 European ancestry controls |
Region | 8p23.2 |
Chromosome id | chr8 |
Chromosome position | 3737384 |
Reported gene | CSMD1 |
Mapped gene | CSMD1 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 64478 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2623702-? |
SNPs | rs2623702 |
Merged | 0 |
SNP id current | 2623702 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.000009 |
Pvalue mlog | 5.04575749056067 |
P value text | (FEV1/FVC decline in asthmatics) |
Or beta | 0.3236 |
%95 Ci | [0.18-0.47] unit decrease |
Platform | Illumina [~ 2500000] (imputed) |
CNV | N |
Mapped trait | FEV/FEC ratio |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004713 |
Study accession | GCST001444 |