SNP Detail For rs2618516
1.Mapping Information
Human SNP ID rs2618516
Human chromosome chr11
Human SNP position 14000092
Pig chromosome chr2
Pig SNP position 48513998
2.Annotation Information
PubMed ID23471985
JournalProc Natl Acad Sci U S A
Linkwww.ncbi.nlm.nih.gov/pubmed/23471985
StudyGenome-wide scan of healthy human connectome discovers SPON1 gene variant influencing dementia severity.
Disease/TraitBrain connectivity
Initial sample331 European ancestry individuals
Replication sample
Region11p15.2
Chromosome idchr11
Chromosome position14000092
Reported geneSPON1
Mapped geneSPON1
Upstream gene id
Downstream gene id
SNP gene ids10418
Upstream gene distance
Downstream gene distance
SNP risk allelers2618516-T
SNPsrs2618516
Merged0
SNP id current2618516
Contextintron_variant
Intergenic0
Allele frequency0.36
P value0.0000000006
Pvalue mlog9.22184874961635
P value text(connectivity pattern)
Or beta0.0018
%95 Ci[NR] unit increase
PlatformIllumina [428287]
CNVN
Mapped traitbrain connectivity measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005210
Study accessionGCST001889