SNP Detail For rs2610025
1.Mapping Information
Human SNP ID rs2610025
Human chromosome chr8
Human SNP position 56592754
Pig chromosome chr4
Pig SNP position 82376333
2.Annotation Information
PubMed ID25917933
JournalJ Psychiatr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/25917933
StudyA genome-wide association study of suicide severity scores in bipolar disorder.
Disease/TraitSuicide in bipolar disorder
Initial sample959 European ancestry individuals
Replication sampleNA
Region8q12.1
Chromosome idchr8
Chromosome position56592754
Reported geneLINC00968, PENK
Mapped geneLOC105375850 - LOC105375851
Upstream gene id105375850
Downstream gene id105375851
SNP gene ids
Upstream gene distance26051
Downstream gene distance46168
SNP risk allelers2610025-A
SNPsrs2610025
Merged0
SNP id current2610025
Contextdownstream_gene_variant
Intergenic1
Allele frequency
P value0.000005
Pvalue mlog5.30102999566398
P value text(suicide behaviour severity)
Or beta0.02332
%95 Ci[0.0069-0.0397] unit decrease
PlatformAffymetrix, Illumina [2659407] (imputed)
CNVN
Mapped traitsuicide behaviour measurement, bipolar disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0006882, http://www.ebi.ac.uk/efo/EFO_0000289
Study accessionGCST002699