Human SNP ID | rs2601828 |
---|---|
Human chromosome | chr16 |
Human SNP position | 4053870 |
Pig chromosome | chr3 |
Pig SNP position | 39189820 |
PubMed ID | 20522523 |
---|---|
Journal | Brain |
Link | www.ncbi.nlm.nih.gov/pubmed/20522523 |
Study | Common genetic variation and susceptibility to partial epilepsies: a genome-wide association study. |
Disease/Trait | Partial epilepsies |
Initial sample | Up to 3,445 European ancestry cases, 6,935 European ancestry controls |
Replication sample | NA |
Region | 16p13.3 |
Chromosome id | chr16 |
Chromosome position | 4053870 |
Reported gene | ADCY9 |
Mapped gene | ADCY9 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 115 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2601828-A |
SNPs | rs2601828 |
Merged | 0 |
SNP id current | 2601828 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.222 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | |
Or beta | 1.12 |
%95 Ci | [1.12-1.31] |
Platform | Illumina [528745] |
CNV | N |
Mapped trait | partial epilepsy |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004263 |
Study accession | GCST000691 |