SNP Detail For rs259919
1.Mapping Information
Human SNP ID rs259919
Human chromosome chr6
Human SNP position 30057726
Pig chromosome chr7
Pig SNP position 25005304
2.Annotation Information
PubMed ID20041166
JournalPLoS Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20041166
StudyCommon genetic variation and the control of HIV-1 in humans.
Disease/TraitHIV-1 control
Initial sample2,362 European ancestry cases
Replication sampleNA
Region6p22.1
Chromosome idchr6
Chromosome position30057726
Reported geneZNRD1, C6orf12
Mapped geneZNRD1-AS1
Upstream gene id
Downstream gene id
SNP gene ids80862
Upstream gene distance
Downstream gene distance
SNP risk allelers259919-?
SNPsrs259919
Merged0
SNP id current259919
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.0000003
Pvalue mlog6.52287874528033
P value text(setpoint)
Or beta
%95 Ci
PlatformIllumina [NR]
CNVN
Mapped traitHIV-1 infection
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000180
Study accessionGCST000549