Human SNP ID | rs2580816 |
---|---|
Human chromosome | chr2 |
Human SNP position | 231933256 |
Pig chromosome | chr15 |
Pig SNP position | 146357632 |
PubMed ID | 20881960 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/20881960 |
Study | Hundreds of variants clustered in genomic loci and biological pathways affect human height. |
Disease/Trait | Height |
Initial sample | 133,653 European ancestry individuals |
Replication sample | 50,074 European ancestry individuals |
Region | 2q37.1 |
Chromosome id | chr2 |
Chromosome position | 231933256 |
Reported gene | NPPC |
Mapped gene | NPPC - DIS3L2 |
Upstream gene id | 4880 |
Downstream gene id | 129563 |
SNP gene ids | |
Upstream gene distance | 6867 |
Downstream gene distance | 28327 |
SNP risk allele | rs2580816-T |
SNPs | rs2580816 |
Merged | 0 |
SNP id current | 2580816 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.19 |
P value | 6E-22 |
Pvalue mlog | 21.2218487496163 |
P value text | |
Or beta | 0.045 |
%95 Ci | [NR] unit decrease |
Platform | Affymetrix, Illumina [2834208] (imputed) |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000817 |