Human SNP ID | rs2573905 |
---|---|
Human chromosome | chrX |
Human SNP position | 92147221 |
Pig chromosome | chrX |
Pig SNP position | 94200934 |
PubMed ID | 19136949 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/19136949 |
Study | Genetic variation in PCDH11X is associated with susceptibility to late-onset Alzheimer__s disease. |
Disease/Trait | Alzheimer__s disease |
Initial sample | 844 European ancestry cases, 1,255 European ancestry controls |
Replication sample | 1,547 European ancestry cases, 1,209 European ancestry controls |
Region | Xq21.31 |
Chromosome id | chrX |
Chromosome position | 92147221 |
Reported gene | PCDH11X |
Mapped gene | PCDH11X |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 27328 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2573905-? |
SNPs | rs2573905 |
Merged | 0 |
SNP id current | 2573905 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.46 |
P value | 0.0000002 |
Pvalue mlog | 6.69897000433601 |
P value text | |
Or beta | 1.29 |
%95 Ci | [1.17-1.42] |
Platform | Illumina [313504] |
CNV | N |
Mapped trait | Alzheimers disease |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0000249 |
Study accession | GCST000315 |