Human SNP ID | rs2572207 |
---|---|
Human chromosome | chr15 |
Human SNP position | 65778355 |
Pig chromosome | chr1 |
Pig SNP position | 181443282 |
PubMed ID | 23222517 |
---|---|
Journal | Nature |
Link | www.ncbi.nlm.nih.gov/pubmed/23222517 |
Study | Seventy-five genetic loci influencing the human red blood cell. |
Disease/Trait | Red blood cell traits |
Initial sample | 62,553 European ancestry individuals, 9,308 South Asian ancestry individuals |
Replication sample | 63,506 European ancestry individuals |
Region | 15q22.31 |
Chromosome id | chr15 |
Chromosome position | 65778355 |
Reported gene | PTPLAD1, DENND4A |
Mapped gene | DENND4A |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 10260 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2572207-C |
SNPs | rs2572207 |
Merged | 0 |
SNP id current | 2572207 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.74 |
P value | 0.000000003 |
Pvalue mlog | 8.52287874528033 |
P value text | (EA, MCV) |
Or beta | 0.153 |
%95 Ci | [0.096-0.210] unit increase |
Platform | Affymetrix, Illumina, Perlegen [2711806] (imputed) |
CNV | N |
Mapped trait | mean corpuscular volume |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004526 |
Study accession | GCST001765 |