SNP Detail For rs2572207
1.Mapping Information
Human SNP ID rs2572207
Human chromosome chr15
Human SNP position 65778355
Pig chromosome chr1
Pig SNP position 181443282
2.Annotation Information
PubMed ID23222517
JournalNature
Linkwww.ncbi.nlm.nih.gov/pubmed/23222517
StudySeventy-five genetic loci influencing the human red blood cell.
Disease/TraitRed blood cell traits
Initial sample62,553 European ancestry individuals, 9,308 South Asian ancestry individuals
Replication sample63,506 European ancestry individuals
Region15q22.31
Chromosome idchr15
Chromosome position65778355
Reported genePTPLAD1, DENND4A
Mapped geneDENND4A
Upstream gene id
Downstream gene id
SNP gene ids10260
Upstream gene distance
Downstream gene distance
SNP risk allelers2572207-C
SNPsrs2572207
Merged0
SNP id current2572207
Contextintron_variant
Intergenic0
Allele frequency0.74
P value0.000000003
Pvalue mlog8.52287874528033
P value text(EA, MCV)
Or beta0.153
%95 Ci[0.096-0.210] unit increase
PlatformAffymetrix, Illumina, Perlegen [2711806] (imputed)
CNVN
Mapped traitmean corpuscular volume
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004526
Study accessionGCST001765