Human SNP ID | rs2570467 |
---|---|
Human chromosome | chr5 |
Human SNP position | 96520975 |
Pig chromosome | chr2 |
Pig SNP position | 106858357 |
PubMed ID | 23966867 |
---|---|
Journal | PLoS Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/23966867 |
Study | Genome-wide association of body fat distribution in African ancestry populations suggests new loci. |
Disease/Trait | Waist circumference |
Initial sample | Up to 23,564 African American individuals |
Replication sample | Up to 10,027 African American individuals |
Region | 5q15 |
Chromosome id | chr5 |
Chromosome position | 96520975 |
Reported gene | PCSK1 |
Mapped gene | LOC101929710 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 101929710 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2570467-A |
SNPs | rs2570467 |
Merged | 0 |
SNP id current | 2570467 |
Context | intron_variant |
Intergenic | 0 |
Allele frequency | 0.86 |
P value | 0.000001 |
Pvalue mlog | 6 |
P value text | (men) |
Or beta | 0.1 |
%95 Ci | [0.061-0.139] unit decrease |
Platform | Affymetrix, Illumina [3200000] (imputed) |
CNV | N |
Mapped trait | waist circumference |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004342 |
Study accession | GCST002137 |