SNP Detail For rs2567519
1.Mapping Information
Human SNP ID rs2567519
Human chromosome chr17
Human SNP position 72792267
Pig chromosome chr12
Pig SNP position 8431532
2.Annotation Information
PubMed ID24665060
JournalJ Med Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/24665060
StudyGenome-wide association study of smoking behaviours among Bangladeshi adults.
Disease/TraitSmoking initiation
Initial sample754 Bangladeshi ancestry never smoker males, 2,565 Bangladeshi ancestry never smoker females, 1,837 Bangladeshi ancestry ever smoker males, 198 Bangladeshi ancestry ever smoker females
Replication sampleNA
Region17q24.3
Chromosome idchr17
Chromosome position72792267
Reported geneSLC39A11
Mapped geneSLC39A11
Upstream gene id
Downstream gene id
SNP gene ids201266
Upstream gene distance
Downstream gene distance
SNP risk allelers2567519-?
SNPsrs2567519
Merged0
SNP id current2567519
Contextintron_variant
Intergenic0
Allele frequency
P value0.0000001
Pvalue mlog7
P value text(males)
Or beta
%95 Ci
PlatformIllumina [1211988] (imputed)
CNVN
Mapped traitsmoking initiation
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0005670
Study accessionGCST002396