SNP Detail For rs256438
1.Mapping Information
Human SNP ID rs256438
Human chromosome chr5
Human SNP position 80070426
Pig chromosome chr2
Pig SNP position 90537939
2.Annotation Information
PubMed ID25436638
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/25436638
StudyGenetic Variants Associated with Serum Thyroid Stimulating Hormone (TSH) Levels in European Americans and African Americans from the eMERGE Network.
Disease/TraitSerum thyroid-stimulating hormone levels
Initial sample4,501 European ancestry individuals, 351 African American individuals
Replication sampleNA
Region5q14.1
Chromosome idchr5
Chromosome position80070426
Reported geneTHBS4
Mapped geneTHBS4, CTD-2201I18.1
Upstream gene id
Downstream gene id
SNP gene ids7060, 101929215
Upstream gene distance
Downstream gene distance
SNP risk allelers256438-C
SNPsrs256438
Merged0
SNP id current256438
Contextintron_variant
Intergenic0
Allele frequency0.36
P value0.000006
Pvalue mlog5.22184874961635
P value text(EA)
Or beta0.05
%95 Ci[0.03-0.07] unit increase
PlatformIllumina [up to 905285]
CNVN
Mapped traitthyroid stimulating hormone measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004748
Study accessionGCST002707