SNP Detail For rs2555155
1.Mapping Information
Human SNP ID rs2555155
Human chromosome chr11
Human SNP position 6501574
Pig chromosome chr9
Pig SNP position 3894424
2.Annotation Information
PubMed ID23725790
JournalTwin Res Hum Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/23725790
StudyGWAS of DNA methylation variation within imprinting control regions suggests parent-of-origin association.
Disease/TraitDNA methylation (variation)
Initial sample256 European ancestry individuals
Replication sample384 European ancestry individuals
Region11p15.4
Chromosome idchr11
Chromosome position6501574
Reported geneFXC1, DNHD1
Mapped geneDNHD1
Upstream gene id
Downstream gene id
SNP gene ids144132
Upstream gene distance
Downstream gene distance
SNP risk allelers2555155-G
SNPsrs2555155
Merged0
SNP id current2555155
Contextintron_variant
Intergenic0
Allele frequency0.117
P value0.000005
Pvalue mlog5.30102999566398
P value text(H19-ICR)
Or beta
%95 Ci
PlatformIllumina [515966]
CNVN
Mapped traitDNA methylation
Mapped trait URIhttp://purl.obolibrary.org/obo/GO_0006306
Study accessionGCST002058