Human SNP ID | rs2554380 |
---|---|
Human chromosome | chr15 |
Human SNP position | 83647132 |
Pig chromosome | chr7 |
Pig SNP position | 56860942 |
PubMed ID | 18391951 |
---|---|
Journal | Nat Genet |
Link | www.ncbi.nlm.nih.gov/pubmed/18391951 |
Study | Many sequence variants affecting diversity of adult human height. |
Disease/Trait | Height |
Initial sample | 30,968 European ancestry individuals |
Replication sample | 8,541 European ancestry individuals |
Region | 15q25.2 |
Chromosome id | chr15 |
Chromosome position | 83647132 |
Reported gene | SH3GL3, ADAMTSL3 |
Mapped gene | SH3GL3 - ADAMTSL3 |
Upstream gene id | 6457 |
Downstream gene id | 57188 |
SNP gene ids | |
Upstream gene distance | 28389 |
Downstream gene distance | 6954 |
SNP risk allele | rs2554380-T |
SNPs | rs2554380 |
Merged | 0 |
SNP id current | 2554380 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | 0.78 |
P value | 0.0000009 |
Pvalue mlog | 6.04575749056067 |
P value text | |
Or beta | 4.5 |
%95 Ci | [2.74-6.26] % s.d. increase |
Platform | Affymetrix, Illumina [up to 304226] |
CNV | N |
Mapped trait | body height |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004339 |
Study accession | GCST000175 |