Human SNP ID | rs2540226 |
---|---|
Human chromosome | chr2 |
Human SNP position | 39731920 |
Pig chromosome | chr3 |
Pig SNP position | 106690302 |
PubMed ID | 18957941 |
---|---|
Journal | Mol Psychiatry |
Link | www.ncbi.nlm.nih.gov/pubmed/18957941 |
Study | Genome-wide association scan for five major dimensions of personality. |
Disease/Trait | Personality dimensions |
Initial sample | 3,972 Sardinian individuals |
Replication sample | 3,903 individuals |
Region | 2p22.1 |
Chromosome id | chr2 |
Chromosome position | 39731920 |
Reported gene | THUMPD2 |
Mapped gene | TMEM178A - THUMPD2 |
Upstream gene id | 130733 |
Downstream gene id | 80745 |
SNP gene ids | |
Upstream gene distance | 13957 |
Downstream gene distance | 4140 |
SNP risk allele | rs2540226-T |
SNPs | rs2540226 |
Merged | 0 |
SNP id current | 2540226 |
Context | downstream_gene_variant |
Intergenic | 1 |
Allele frequency | 0.53 |
P value | 0.000003 |
Pvalue mlog | 5.52287874528033 |
P value text | (agreeableness) |
Or beta | 0.13 |
%95 Ci | [NR] s.d. increase |
Platform | Affymetrix [362129] |
CNV | N |
Mapped trait | personality trait |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004365 |
Study accession | GCST000273 |