SNP Detail For rs252817
1.Mapping Information
Human SNP ID rs252817
Human chromosome chr5
Human SNP position 107388887
Pig chromosome chr2
Pig SNP position 117058222
2.Annotation Information
PubMed ID20889312
JournalSchizophr Res
Linkwww.ncbi.nlm.nih.gov/pubmed/20889312
StudyA genome-wide meta-analysis identifies novel loci associated with schizophrenia and bipolar disorder.
Disease/TraitBipolar disorder and schizophrenia
Initial sample651 European ancestry bipolar cases, 1,171 European ancestry schizophrenia cases, 2,412 European ancestry controls
Replication sampleNA
Region5q21.3
Chromosome idchr5
Chromosome position107388887
Reported geneNR
Mapped geneEFNA5
Upstream gene id
Downstream gene id
SNP gene ids1946
Upstream gene distance
Downstream gene distance
SNP risk allelers252817-?
SNPsrs252817
Merged0
SNP id current252817
Contextintron_variant
Intergenic0
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta1.2431
%95 Ci[NR]
PlatformAffymetrix [722112]
CNVN
Mapped traitmental or behavioural disorder
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0000677
Study accessionGCST000821