Human SNP ID | rs2523989 |
---|---|
Human chromosome | chr6 |
Human SNP position | 30110498 |
Pig chromosome | chr7 |
Pig SNP position | 24950047 |
PubMed ID | 25936594 |
---|---|
Journal | J Autoimmun |
Link | www.ncbi.nlm.nih.gov/pubmed/25936594 |
Study | Genome wide identification of new genes and pathways in patients with both autoimmune thyroiditis and type 1 diabetes. |
Disease/Trait | Type 1 diabetes and autoimmune thyroid diseases |
Initial sample | 346 European ancestry cases, 727 European ancestry controls |
Replication sample | 185 European ancestry cases, 340 European ancestry controls |
Region | 6p22.1 |
Chromosome id | chr6 |
Chromosome position | 30110498 |
Reported gene | TRIM31 |
Mapped gene | TRIM31-AS1, TRIM31 |
Upstream gene id | |
Downstream gene id | |
SNP gene ids | 104533120, 11074 |
Upstream gene distance | |
Downstream gene distance | |
SNP risk allele | rs2523989-A |
SNPs | rs2523989 |
Merged | 0 |
SNP id current | 2523989 |
Context | missense_variant |
Intergenic | 0 |
Allele frequency | NR |
P value | 0.00000002 |
Pvalue mlog | 7.69897000433601 |
P value text | |
Or beta | 1.7499 |
%95 Ci | |
Platform | Illumina [514008] |
CNV | N |
Mapped trait | autoimmune thyroid disease, type I diabetes mellitus |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0006812, http://www.ebi.ac.uk/efo/EFO_0001359 |
Study accession | GCST002876 |