SNP Detail For rs2522056
1.Mapping Information
Human SNP ID rs2522056
Human chromosome chr5
Human SNP position 132466034
Pig chromosome chr2
Pig SNP position 140214796
2.Annotation Information
PubMed ID20031576
JournalCirc Cardiovasc Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20031576
StudyAssociation of novel genetic Loci with circulating fibrinogen levels: a genome-wide association study in 6 population-based cohorts.
Disease/TraitFibrinogen
Initial sample22,096 European ancestry individuals
Replication sample17,686 European ancestry female individuals
Region5q31.1
Chromosome idchr5
Chromosome position132466034
Reported geneIRF1
Mapped geneC5orf56
Upstream gene id
Downstream gene id
SNP gene ids441108
Upstream gene distance
Downstream gene distance
SNP risk allelers2522056-A
SNPsrs2522056
Merged0
SNP id current2522056
Contextintron_variant
Intergenic0
Allele frequency0.21
P value0.000000000000001
Pvalue mlog15
P value text
Or beta0.06
%95 Ci[0.04-0.08] g/L decrease
PlatformAffymetrix, Illumina [~ 2661766] (imputed)
CNVN
Mapped traitfibrinogen measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004623
Study accessionGCST000366