SNP Detail For rs251253
1.Mapping Information
Human SNP ID rs251253
Human chromosome chr5
Human SNP position 173053333
Pig chromosome chr16
Pig SNP position 55527182
2.Annotation Information
PubMed ID20062060
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/20062060
StudyGenome-wide association study of PR interval.
Disease/TraitPR interval
Initial sample28,517 European ancestry individuals
Replication sampleNA
Region5q35.1
Chromosome idchr5
Chromosome position173053333
Reported geneNKX2-5, C5orf41
Mapped geneATP6V0E1 - CREBRF
Upstream gene id8992
Downstream gene id153222
SNP gene ids
Upstream gene distance18436
Downstream gene distance3016
SNP risk allelers251253-C
SNPsrs251253
Merged0
SNP id current251253
Contextupstream_gene_variant
Intergenic1
Allele frequency0.4
P value0.0000000000009
Pvalue mlog12.0457574905606
P value text
Or beta1.49
%95 Ci[1.08-1.90] ms decrease
PlatformAffymetrix, Illumina [~ 2500000] (imputed)
CNVN
Mapped traitPR interval
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004462
Study accessionGCST000562