SNP Detail For rs2504063
1.Mapping Information
Human SNP ID rs2504063
Human chromosome chr6
Human SNP position 151769572
Pig chromosome chr1
Pig SNP position 16938994
2.Annotation Information
PubMed ID19801982
JournalNat Genet
Linkwww.ncbi.nlm.nih.gov/pubmed/19801982
StudyTwenty bone-mineral-density loci identified by large-scale meta-analysis of genome-wide association studies.
Disease/TraitBone mineral density (spine)
Initial sample19,195 European ancestry individuals
Replication sampleNA
Region6q25.1
Chromosome idchr6
Chromosome position151769572
Reported geneESR1
Mapped geneESR1
Upstream gene id
Downstream gene id
SNP gene ids2099
Upstream gene distance
Downstream gene distance
SNP risk allelers2504063-A
SNPsrs2504063
Merged0
SNP id current2504063
Contextintron_variant
Intergenic0
Allele frequency0.4
P value0.00000000006
Pvalue mlog10.2218487496163
P value text
Or beta0.08
%95 Ci[0.06-0.10] s.d. decrease
PlatformAffymetrix, Illumina [2543686] (imputed)
CNVN
Mapped traitbone density
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0003923
Study accessionGCST000494