SNP Detail For rs2502399
1.Mapping Information
Human SNP ID rs2502399
Human chromosome chr6
Human SNP position 113138211
Pig chromosome chr1
Pig SNP position 89066745
2.Annotation Information
PubMed ID26545630
JournalNeurobiol Aging
Linkwww.ncbi.nlm.nih.gov/pubmed/26545630
StudyA potential endophenotype for Alzheimer__s disease: cerebrospinal fluid clusterin.
Disease/TraitPlasma clusterin levels
Initial sample521 Alzheimer__s disease cases, 297 controls
Replication sampleNA
Region6q21
Chromosome idchr6
Chromosome position113138211
Reported geneLOC102724704
Mapped geneLOC105377956 - LOC105377955
Upstream gene id105377956
Downstream gene id105377955
SNP gene ids
Upstream gene distance6665
Downstream gene distance30284
SNP risk allelers2502399-?
SNPsrs2502399
Merged
SNP id current2502399
Contextintergenic_variant
Intergenic1
Allele frequency
P value0.000005
Pvalue mlog5.30102999566398
P value text
Or beta
%95 Ci
PlatformIllumina [5970354] (imputed)
CNVN
Mapped traitplasma clusterin measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0007656
Study accessionGCST003133