SNP Detail For rs2473967
1.Mapping Information
Human SNP ID rs2473967
Human chromosome chr6
Human SNP position 113158133
Pig chromosome chr1
Pig SNP position 89105502
2.Annotation Information
PubMed ID23829686
JournalHum Genomics
Linkwww.ncbi.nlm.nih.gov/pubmed/23829686
StudyRank-based genome-wide analysis reveals the association of ryanodine receptor-2 gene variants with childhood asthma among human populations.
Disease/TraitAsthma (childhood onset)
Initial sample429 European ancestry affected offspring trios
Replication sample52 African American affected offspring trios, 46 Hispanic affected offspring trios
Region6q21
Chromosome idchr6
Chromosome position113158133
Reported geneintergenic
Mapped geneLOC105377956 - LOC105377955
Upstream gene id105377956
Downstream gene id105377955
SNP gene ids
Upstream gene distance26587
Downstream gene distance10362
SNP risk allelers2473967-?
SNPsrs2473967
Merged0
SNP id current2473967
Contextintergenic_variant
Intergenic1
Allele frequencyNR
P value0.000002
Pvalue mlog5.69897000433601
P value text
Or beta
%95 Ci
PlatformAffymetrix [786195]
CNVN
Mapped traitchildhood onset asthma
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004591
Study accessionGCST002088