Human SNP ID | rs2473967 |
---|---|
Human chromosome | chr6 |
Human SNP position | 113158133 |
Pig chromosome | chr1 |
Pig SNP position | 89105502 |
PubMed ID | 23829686 |
---|---|
Journal | Hum Genomics |
Link | www.ncbi.nlm.nih.gov/pubmed/23829686 |
Study | Rank-based genome-wide analysis reveals the association of ryanodine receptor-2 gene variants with childhood asthma among human populations. |
Disease/Trait | Asthma (childhood onset) |
Initial sample | 429 European ancestry affected offspring trios |
Replication sample | 52 African American affected offspring trios, 46 Hispanic affected offspring trios |
Region | 6q21 |
Chromosome id | chr6 |
Chromosome position | 113158133 |
Reported gene | intergenic |
Mapped gene | LOC105377956 - LOC105377955 |
Upstream gene id | 105377956 |
Downstream gene id | 105377955 |
SNP gene ids | |
Upstream gene distance | 26587 |
Downstream gene distance | 10362 |
SNP risk allele | rs2473967-? |
SNPs | rs2473967 |
Merged | 0 |
SNP id current | 2473967 |
Context | intergenic_variant |
Intergenic | 1 |
Allele frequency | NR |
P value | 0.000002 |
Pvalue mlog | 5.69897000433601 |
P value text | |
Or beta | |
%95 Ci | |
Platform | Affymetrix [786195] |
CNV | N |
Mapped trait | childhood onset asthma |
Mapped trait URI | http://www.ebi.ac.uk/efo/EFO_0004591 |
Study accession | GCST002088 |