SNP Detail For rs2472476
1.Mapping Information
Human SNP ID rs2472476
Human chromosome chr9
Human SNP position 104769675
Pig chromosome chr1
Pig SNP position 275516146
2.Annotation Information
PubMed ID23251661
JournalPLoS One
Linkwww.ncbi.nlm.nih.gov/pubmed/23251661
StudyNovel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population.
Disease/TraitObesity-related traits
Initial sample815 Hispanic children from 263 families
Replication sampleNA
Region9q31.1
Chromosome idchr9
Chromosome position104769675
Reported geneNIPSNAP3B
Mapped geneNIPSNAP3B
Upstream gene id
Downstream gene id
SNP gene ids55335
Upstream gene distance
Downstream gene distance
SNP risk allelers2472476-G
SNPsrs2472476
Merged0
SNP id current2472476
Contextintron_variant
Intergenic0
Allele frequency0.267
P value0.000003
Pvalue mlog5.52287874528033
P value text(GLU )
Or beta0.03
%95 Ci[NR] mg/dL increase
PlatformIllumina [899892]
CNVN
Mapped traitfasting blood glucose measurement
Mapped trait URIhttp://www.ebi.ac.uk/efo/EFO_0004465
Study accessionGCST001762